Remember to add the skirmish players in the Edit->Player List. Also, make sure, if you have scripts, that their all in the PlyrCivilian folder. When you put scripts in any of the skirmish player folders (including the Nuetral folder), it thinks you want to create new scripts for the skirmish players. So it will deactivate the skirmish scripts that EA Games made for the map. The PlyrCivilian folder is set aside for scripts that only have to do with the map.
If this doesn't help you, upload you map so I can check it out. Just put the map folder in a ZIP folder & upload it through the "Insert a File" link when posting a post.
Me Myself And Pi wrote: